2017-8-11 16:0:32025-05-23 15:03:12
_ec
description
MarR/DUF24 family transcription repressor of the catD-catE operon
[SW|MarR family|MarR/DUF24 family] transcription repressor of the [[gene|catD]]-[[gene|catE]] operon
locus
BSU33680
BSU_33680
proteinLength
236
108
geneLength
708
327
product
MarR/DUF24 family transcription repressor
[SW|MarR family|MarR/DUF24 family] transcription repressor
outlinks
bsu
BSU33680
BSU_33680
Gene
Coordinates
3,457,615 → 3,457,941
3,457,615 3,457,941
The protein
Catalyzed reaction/ biological activity
[[MarR/DUF24 family]] transcription repressor of the'' [[gene|catD]]-[[gene|catE]]'' operon [Pubmed|20639328]
[SW|MarR family|MarR/DUF24 family] transcription repressor of the [[gene|catD]]-[[gene|catE]] operon [Pubmed|20639328]
The protein
Protein family
[[MarR/DUF24 family]]
[SW|MarR family|MarR/DUF24 family]
The protein
Paralogous protein(s)
[[protein|YodB]], [[protein|YdzF]]
[[this]]
The protein
Modification
in responsse to the presence of diamides or quinones, Cys-7 forms intermolecular disulfide bonds, this results in loss of DNA-bindig ability (induction of ''[[gene|catD]]-[[gene|catE]]'') [Pubmed|20639328]
in responsse to the presence of diamides or quinones, Cys-7 forms intermolecular disulfide bonds, this results in loss of DNA-bindig ability (induction of [[gene|catD]]-[[gene|catE]]) [Pubmed|20639328]
Biological materials
Mutant
MGNA-A451 (yvaP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/451 NBRP B. subtilis, Japan]
MGNA-A451 (yvaP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/451 NBRP B. subtilis, Japan]
BKE33680 ([[gene|catR]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33680 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACTTTTCACCTCGTCTG, downstream forward: _UP4_TAATTGCTAAAATGGTTCTG
BKK33680 ([[gene|catR]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33680 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACTTTTCACCTCGTCTG, downstream forward: _UP4_TAATTGCTAAAATGGTTCTG
Labs working on this gene/protein
[SW|Haike Antelmann],University of Greifswald, Germany
References
The protein
[SW|Domains]
[SW|HTH hxlR-type domain] (aa 7-106) (according to UniProt)
The protein
Structure
[PDB|5HS7] ([[protein|YodB]], 46% identity) [Pubmed|27531959]
labs
[SW|Haike Antelmann],University of Greifswald, Germany